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Structured Review

Addgene inc kifc3
a Western blot detecting <t>KIFC3</t> and senescence markers in RCTE cells with or without IR exposure. Three experiments were repeated independently with similar results. Immunofluorescent images showing KIFC3 (green) and polyglutamylated sinc-MTs (labeled with GT335 antibody, red) ( b ) and relative intensity of KIFC3 ( c ) in RCTE cells with or without IR exposure. CENTRIN2 (cyan) labels the ciliary base . n = 50 cells. Scale bar, 10 μm. SIM series section ( d ) and 3D surface-rendering reconstruction ( e ). Scale bar, 10 μm. Localization of KIFC3 (green) along polyglutamylated sinc-MTs (red) in RCTE cells exposed to IR. f Immunofluorescence images showing KIFC3 and sinc-MTs (labeled with α-tubulin) in control or siTTLL5 RCTE cells after IR exposure. CENTRIN2 labels the ciliary base. Scale bar, 10 μm. Western blot of senescence markers ( g ), quantitation of relative protein levels of senescence markers ( h ), SA-β-gal staining ( i ), relative mRNA level of SASP genes ( j ) in control or shKIFC3 RCTE cells at day 10 after IR exposure. Scale bar, 50 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( d – f ). Source data are provided as a file.
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Images

1) Product Images from "Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner"

Article Title: Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner

Journal: Nature Communications

doi: 10.1038/s41467-024-52363-w

a Western blot detecting KIFC3 and senescence markers in RCTE cells with or without IR exposure. Three experiments were repeated independently with similar results. Immunofluorescent images showing KIFC3 (green) and polyglutamylated sinc-MTs (labeled with GT335 antibody, red) ( b ) and relative intensity of KIFC3 ( c ) in RCTE cells with or without IR exposure. CENTRIN2 (cyan) labels the ciliary base . n = 50 cells. Scale bar, 10 μm. SIM series section ( d ) and 3D surface-rendering reconstruction ( e ). Scale bar, 10 μm. Localization of KIFC3 (green) along polyglutamylated sinc-MTs (red) in RCTE cells exposed to IR. f Immunofluorescence images showing KIFC3 and sinc-MTs (labeled with α-tubulin) in control or siTTLL5 RCTE cells after IR exposure. CENTRIN2 labels the ciliary base. Scale bar, 10 μm. Western blot of senescence markers ( g ), quantitation of relative protein levels of senescence markers ( h ), SA-β-gal staining ( i ), relative mRNA level of SASP genes ( j ) in control or shKIFC3 RCTE cells at day 10 after IR exposure. Scale bar, 50 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( d – f ). Source data are provided as a file.
Figure Legend Snippet: a Western blot detecting KIFC3 and senescence markers in RCTE cells with or without IR exposure. Three experiments were repeated independently with similar results. Immunofluorescent images showing KIFC3 (green) and polyglutamylated sinc-MTs (labeled with GT335 antibody, red) ( b ) and relative intensity of KIFC3 ( c ) in RCTE cells with or without IR exposure. CENTRIN2 (cyan) labels the ciliary base . n = 50 cells. Scale bar, 10 μm. SIM series section ( d ) and 3D surface-rendering reconstruction ( e ). Scale bar, 10 μm. Localization of KIFC3 (green) along polyglutamylated sinc-MTs (red) in RCTE cells exposed to IR. f Immunofluorescence images showing KIFC3 and sinc-MTs (labeled with α-tubulin) in control or siTTLL5 RCTE cells after IR exposure. CENTRIN2 labels the ciliary base. Scale bar, 10 μm. Western blot of senescence markers ( g ), quantitation of relative protein levels of senescence markers ( h ), SA-β-gal staining ( i ), relative mRNA level of SASP genes ( j ) in control or shKIFC3 RCTE cells at day 10 after IR exposure. Scale bar, 50 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( d – f ). Source data are provided as a file.

Techniques Used: Western Blot, Labeling, Immunofluorescence, Control, Quantitation Assay, Staining

a Immunoprecipitation showing no interaction between V5-tagged KIFC3 and Myc-tagged FBF1 when overexpressed in 293 T cells. b , c Immunoprecipitation of endogenous CENEXIN1 with Myc-tagged FBF1 in IR-treated RCTE cells. d V5-tagged KIFC3 immunoprecipitates with EGFP-tagged CENEXIN1 when overexpressed in 293 T cells. e , f Endogenous CENEXIN1 immunoprecipitates with V5-tagged KIFC3 in control or IR-treated RCTE cells. g Immunofluorescence images showing PML-NBs translocation of CENEXIN1 (green) in IR-treated RCTE cells. PML (red) labels the PML-NBs. Scale bar, 10 μm. h 3D surface-rendering reconstruction of SIM section images showing the spatial relationship among CENEXIN1 (green), KIFC3 (red), and EB1 (cyan) labeled plus-ends of sinc-MTs at ciliary base in IR-treated RCTE cells. Scale bar, 10 μm. Three experiments were repeated independently with similar results ( a – h ). Source data are provided as a file.
Figure Legend Snippet: a Immunoprecipitation showing no interaction between V5-tagged KIFC3 and Myc-tagged FBF1 when overexpressed in 293 T cells. b , c Immunoprecipitation of endogenous CENEXIN1 with Myc-tagged FBF1 in IR-treated RCTE cells. d V5-tagged KIFC3 immunoprecipitates with EGFP-tagged CENEXIN1 when overexpressed in 293 T cells. e , f Endogenous CENEXIN1 immunoprecipitates with V5-tagged KIFC3 in control or IR-treated RCTE cells. g Immunofluorescence images showing PML-NBs translocation of CENEXIN1 (green) in IR-treated RCTE cells. PML (red) labels the PML-NBs. Scale bar, 10 μm. h 3D surface-rendering reconstruction of SIM section images showing the spatial relationship among CENEXIN1 (green), KIFC3 (red), and EB1 (cyan) labeled plus-ends of sinc-MTs at ciliary base in IR-treated RCTE cells. Scale bar, 10 μm. Three experiments were repeated independently with similar results ( a – h ). Source data are provided as a file.

Techniques Used: Immunoprecipitation, Control, Immunofluorescence, Translocation Assay, Labeling

a Diagram of WT and KIFC3 variants used in experiments. b Endogenous CENEXIN1 immunoprecipitates with V5-tagged WT or KIFC3 DN in RCTE cells, asterisk labels KIFC3 ∆N . c Immunofluorescent images showing localization of NeonGreen(NG)-tagged KIFC3 truncation variants (green) in RCTE cells. γ-tubulin (red) labels the ciliary base. Scale bar, 10 μm. Immunofluorescence images showing the effect of re-expression of KIFC3 or KIFC3 DN on CENEXIN1 and FBF1 translocation. CENEXIN1 (green), FBF1 (red) and PML (cyan) were immunostained by antibodies, respectively ( d ) and quantitation of PML-NBs ( e ) in shKIFC3 RCTE cells with or without IR exposure ( n = 40 cells). Scale bar, 10 μm. Immunofluorescence images showing the changes of CENEXIN1 (red) and PML (cyan) in control or over-expression NG-tagged KIFC3 DN RCTE cells with or without IR treatment ( f ) and quantitation of PML-NBs numbers per cell ( n = 40 cells) ( g ). Localization of KIFC3 DN was shown by NG direct fluorescence (green). Scale bar, 10 μm. h SA-β-gal staining of IR-treated shKIFC3 RCTE cells re-expressing KIFC3 or KIFC3 DN . Scale bar, 100 μm. i Immunofluorescence images showing the impact on the PML-NBs translocation of CENEXIN1 (green) and FBF1 (red) after re-expressing CEP170C-tagged KIFC3 in IR-treated shKIFC3 RCTE cells. γ-tubulin (cyan) labels the ciliary base. YFP direct fluorescence shown CEP170C-tagged KIFC3. Scale bar, 10 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( b , c , h , i ). Source data are provided as a file.
Figure Legend Snippet: a Diagram of WT and KIFC3 variants used in experiments. b Endogenous CENEXIN1 immunoprecipitates with V5-tagged WT or KIFC3 DN in RCTE cells, asterisk labels KIFC3 ∆N . c Immunofluorescent images showing localization of NeonGreen(NG)-tagged KIFC3 truncation variants (green) in RCTE cells. γ-tubulin (red) labels the ciliary base. Scale bar, 10 μm. Immunofluorescence images showing the effect of re-expression of KIFC3 or KIFC3 DN on CENEXIN1 and FBF1 translocation. CENEXIN1 (green), FBF1 (red) and PML (cyan) were immunostained by antibodies, respectively ( d ) and quantitation of PML-NBs ( e ) in shKIFC3 RCTE cells with or without IR exposure ( n = 40 cells). Scale bar, 10 μm. Immunofluorescence images showing the changes of CENEXIN1 (red) and PML (cyan) in control or over-expression NG-tagged KIFC3 DN RCTE cells with or without IR treatment ( f ) and quantitation of PML-NBs numbers per cell ( n = 40 cells) ( g ). Localization of KIFC3 DN was shown by NG direct fluorescence (green). Scale bar, 10 μm. h SA-β-gal staining of IR-treated shKIFC3 RCTE cells re-expressing KIFC3 or KIFC3 DN . Scale bar, 100 μm. i Immunofluorescence images showing the impact on the PML-NBs translocation of CENEXIN1 (green) and FBF1 (red) after re-expressing CEP170C-tagged KIFC3 in IR-treated shKIFC3 RCTE cells. γ-tubulin (cyan) labels the ciliary base. YFP direct fluorescence shown CEP170C-tagged KIFC3. Scale bar, 10 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( b , c , h , i ). Source data are provided as a file.

Techniques Used: Immunofluorescence, Expressing, Translocation Assay, Quantitation Assay, Control, Over Expression, Fluorescence, Staining

a – d SA-β-gal staining ( a ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200 cells per field) ( b ) in control or siCENEXIN1 RCTE cells with or without IR exposure. Western blot of senescence markers ( c ), and relative mRNA level of SASP genes ( d ) in control or shCENEXIN1 RCTE cells with or without IR exposure. For IR treatment, cells were collected at day 10 after irradiation. Scale bar, 100 μm. SA-β-gal staining ( e ) and quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200–300 cells per field) ( f ), in control or CENEXIN1 -/- RCTE cells re-expressing CENEXIN1 or ODF2 (iso6) at day 10 after IR exposure. Scale bar, 100 μm. SA-β-gal staining ( g ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 3-4fields per experiment, 200–500 cells per field) ( h ), and relative mRNA level of SASP genes ( i ) in IL-1β-treated (3 ng/ml for 5 days) control or shCENEXIN1 RCTE cells. Scale bar, 50 μm. j Proposed working model: Exposure to irreparable stresses triggers the reorganization of microtubules (MTs), leading to the nucleation of sinc-MTs in the proximity of the nuclear envelop towards the ciliary base. Concurrently, the minus-end-directed kinesin KIFC3 is recruited to the ciliary base. It subsequently facilitates the transportation of the CENEXIN1-FBF1 cargo complex along the sinc-MTs, directing it towards the nucleus. This process initiates cellular senescence in stressed human cells. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( c ). Source data are provided as a file.
Figure Legend Snippet: a – d SA-β-gal staining ( a ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200 cells per field) ( b ) in control or siCENEXIN1 RCTE cells with or without IR exposure. Western blot of senescence markers ( c ), and relative mRNA level of SASP genes ( d ) in control or shCENEXIN1 RCTE cells with or without IR exposure. For IR treatment, cells were collected at day 10 after irradiation. Scale bar, 100 μm. SA-β-gal staining ( e ) and quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200–300 cells per field) ( f ), in control or CENEXIN1 -/- RCTE cells re-expressing CENEXIN1 or ODF2 (iso6) at day 10 after IR exposure. Scale bar, 100 μm. SA-β-gal staining ( g ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 3-4fields per experiment, 200–500 cells per field) ( h ), and relative mRNA level of SASP genes ( i ) in IL-1β-treated (3 ng/ml for 5 days) control or shCENEXIN1 RCTE cells. Scale bar, 50 μm. j Proposed working model: Exposure to irreparable stresses triggers the reorganization of microtubules (MTs), leading to the nucleation of sinc-MTs in the proximity of the nuclear envelop towards the ciliary base. Concurrently, the minus-end-directed kinesin KIFC3 is recruited to the ciliary base. It subsequently facilitates the transportation of the CENEXIN1-FBF1 cargo complex along the sinc-MTs, directing it towards the nucleus. This process initiates cellular senescence in stressed human cells. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( c ). Source data are provided as a file.

Techniques Used: Staining, Quantitation Assay, Control, Western Blot, Irradiation, Expressing



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Image Search Results


There was a correlation between KIFC3 and the prognosis of NSCLC patients. (a) High expression of KIF3 was observed in NSCLC tissues by RT‐PCR ( n = 45) and (b) western blot. (c) KIFC3 high expression was associated with short disease free survival and (d) overall survival of NSCLC patients. N = 3, *** p < 0.001. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; RT‐PCR, reverse transcription polymerase chain reaction.

Journal: Thoracic Cancer

Article Title: KIFC3 promotes the progression of non–small cell lung cancer cells through the PI3K/Akt pathway

doi: 10.1111/1759-7714.15465

Figure Lengend Snippet: There was a correlation between KIFC3 and the prognosis of NSCLC patients. (a) High expression of KIF3 was observed in NSCLC tissues by RT‐PCR ( n = 45) and (b) western blot. (c) KIFC3 high expression was associated with short disease free survival and (d) overall survival of NSCLC patients. N = 3, *** p < 0.001. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; RT‐PCR, reverse transcription polymerase chain reaction.

Article Snippet: The small interfering RNA (siRNA) negative control (si‐NC, TTCTCCGAACGTGTCACGT) and siRNA targeting KIFC3 (si‐KIFC3: CACTAGCGAGACGCTCTA′) were by synthesized by Ribobio (Guangzhou, China).

Techniques: Expressing, Reverse Transcription Polymerase Chain Reaction, Western Blot, Reverse Transcription, Polymerase Chain Reaction

KIFC3 knockdown repressed NSCLC cells proliferation and invasion as well as migration. (a) KIFC3 was prominently enhanced in NSCLC cells. (b) There was a sharp reduction in the expression of KIFC3 in NSCLC cells detected by RT‐PCR and (c) western blot assay. (d) MTT results revealed a decreased viability of NSCLC cells upon KIFC3 silencing. (e) Clone formation assay revealed a decreased proliferation rate of NSCLC cells upon KIFC3 silencing. (f) Transwell invasion assay illustrated that KIFC3 lack negatively modulated the invasive ability of NSCLC cells (scale bar = 50 μm). (g) The wound healing rate of NSCLC cells was remarkably decreased after KIFC3 absence (scale bar = 100 μm). N = 3, ** p < 0.01; *** p < 0.001. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; RT‐PCR, reverse transcription polymerase chain reaction.

Journal: Thoracic Cancer

Article Title: KIFC3 promotes the progression of non–small cell lung cancer cells through the PI3K/Akt pathway

doi: 10.1111/1759-7714.15465

Figure Lengend Snippet: KIFC3 knockdown repressed NSCLC cells proliferation and invasion as well as migration. (a) KIFC3 was prominently enhanced in NSCLC cells. (b) There was a sharp reduction in the expression of KIFC3 in NSCLC cells detected by RT‐PCR and (c) western blot assay. (d) MTT results revealed a decreased viability of NSCLC cells upon KIFC3 silencing. (e) Clone formation assay revealed a decreased proliferation rate of NSCLC cells upon KIFC3 silencing. (f) Transwell invasion assay illustrated that KIFC3 lack negatively modulated the invasive ability of NSCLC cells (scale bar = 50 μm). (g) The wound healing rate of NSCLC cells was remarkably decreased after KIFC3 absence (scale bar = 100 μm). N = 3, ** p < 0.01; *** p < 0.001. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; RT‐PCR, reverse transcription polymerase chain reaction.

Article Snippet: The small interfering RNA (siRNA) negative control (si‐NC, TTCTCCGAACGTGTCACGT) and siRNA targeting KIFC3 (si‐KIFC3: CACTAGCGAGACGCTCTA′) were by synthesized by Ribobio (Guangzhou, China).

Techniques: Knockdown, Migration, Expressing, Reverse Transcription Polymerase Chain Reaction, Western Blot, Tube Formation Assay, Transwell Invasion Assay, Reverse Transcription, Polymerase Chain Reaction

Lack of KIFC3 inhibited the PI3K/Akt pathway. (a) The related proteins of PI3K/Akt pathway were tested by western blot assay. (b) The p‐PI3K and p‐Akt levels were noteworthily down‐regulated in KIFC3 knockdown NCI‐H1299 and (c) NCI‐H460 cells. N = 3, ** p < 0.01; *** p < 0.001. KIFC3, kinesin family member C3; p‐Akt, phosphorylated Akt; PI3K/Akt, phosphatidylinositol‐3‐kinase/protein kinase B.

Journal: Thoracic Cancer

Article Title: KIFC3 promotes the progression of non–small cell lung cancer cells through the PI3K/Akt pathway

doi: 10.1111/1759-7714.15465

Figure Lengend Snippet: Lack of KIFC3 inhibited the PI3K/Akt pathway. (a) The related proteins of PI3K/Akt pathway were tested by western blot assay. (b) The p‐PI3K and p‐Akt levels were noteworthily down‐regulated in KIFC3 knockdown NCI‐H1299 and (c) NCI‐H460 cells. N = 3, ** p < 0.01; *** p < 0.001. KIFC3, kinesin family member C3; p‐Akt, phosphorylated Akt; PI3K/Akt, phosphatidylinositol‐3‐kinase/protein kinase B.

Article Snippet: The small interfering RNA (siRNA) negative control (si‐NC, TTCTCCGAACGTGTCACGT) and siRNA targeting KIFC3 (si‐KIFC3: CACTAGCGAGACGCTCTA′) were by synthesized by Ribobio (Guangzhou, China).

Techniques: Western Blot, Knockdown

KIFC3 regulates the malignant behavior of lung cancer through PI3K/Akt pathway. (a) SC79 restored the decreased levels of p‐PI3K and p‐Akt induced by KIFC3 inhibition. (b) The decreased cell viability triggered by si‐KIFC3 were eliminated by SC79 in NSCLC cells. (c) Activation of the PI3K/Akt pathway effectively stimulated the proliferation rate reduced by si‐KIFC3#1. (d) The suppression function of KIFC3 silencing in cell invasion was also reversed by SC79 (scale bar = 50 μm). (e) Activation of the PI3K/Akt pathway reversed the functions of KIFC3 knockdown in cell migration (scale bar = 100 μm). N = 3, * p < 0.05; ** p < 0.01. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; p‐Akt, phosphorylated Akt; p‐PI3K, phosphorylated PI3K; PI3K/Akt, phosphatidylinositol‐3‐kinase/protein kinase B.

Journal: Thoracic Cancer

Article Title: KIFC3 promotes the progression of non–small cell lung cancer cells through the PI3K/Akt pathway

doi: 10.1111/1759-7714.15465

Figure Lengend Snippet: KIFC3 regulates the malignant behavior of lung cancer through PI3K/Akt pathway. (a) SC79 restored the decreased levels of p‐PI3K and p‐Akt induced by KIFC3 inhibition. (b) The decreased cell viability triggered by si‐KIFC3 were eliminated by SC79 in NSCLC cells. (c) Activation of the PI3K/Akt pathway effectively stimulated the proliferation rate reduced by si‐KIFC3#1. (d) The suppression function of KIFC3 silencing in cell invasion was also reversed by SC79 (scale bar = 50 μm). (e) Activation of the PI3K/Akt pathway reversed the functions of KIFC3 knockdown in cell migration (scale bar = 100 μm). N = 3, * p < 0.05; ** p < 0.01. KIFC3, kinesin family member C3; NSCLC, non–small cell lung cancer; p‐Akt, phosphorylated Akt; p‐PI3K, phosphorylated PI3K; PI3K/Akt, phosphatidylinositol‐3‐kinase/protein kinase B.

Article Snippet: The small interfering RNA (siRNA) negative control (si‐NC, TTCTCCGAACGTGTCACGT) and siRNA targeting KIFC3 (si‐KIFC3: CACTAGCGAGACGCTCTA′) were by synthesized by Ribobio (Guangzhou, China).

Techniques: Inhibition, Activation Assay, Knockdown, Migration

a Western blot detecting KIFC3 and senescence markers in RCTE cells with or without IR exposure. Three experiments were repeated independently with similar results. Immunofluorescent images showing KIFC3 (green) and polyglutamylated sinc-MTs (labeled with GT335 antibody, red) ( b ) and relative intensity of KIFC3 ( c ) in RCTE cells with or without IR exposure. CENTRIN2 (cyan) labels the ciliary base . n = 50 cells. Scale bar, 10 μm. SIM series section ( d ) and 3D surface-rendering reconstruction ( e ). Scale bar, 10 μm. Localization of KIFC3 (green) along polyglutamylated sinc-MTs (red) in RCTE cells exposed to IR. f Immunofluorescence images showing KIFC3 and sinc-MTs (labeled with α-tubulin) in control or siTTLL5 RCTE cells after IR exposure. CENTRIN2 labels the ciliary base. Scale bar, 10 μm. Western blot of senescence markers ( g ), quantitation of relative protein levels of senescence markers ( h ), SA-β-gal staining ( i ), relative mRNA level of SASP genes ( j ) in control or shKIFC3 RCTE cells at day 10 after IR exposure. Scale bar, 50 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( d – f ). Source data are provided as a file.

Journal: Nature Communications

Article Title: Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner

doi: 10.1038/s41467-024-52363-w

Figure Lengend Snippet: a Western blot detecting KIFC3 and senescence markers in RCTE cells with or without IR exposure. Three experiments were repeated independently with similar results. Immunofluorescent images showing KIFC3 (green) and polyglutamylated sinc-MTs (labeled with GT335 antibody, red) ( b ) and relative intensity of KIFC3 ( c ) in RCTE cells with or without IR exposure. CENTRIN2 (cyan) labels the ciliary base . n = 50 cells. Scale bar, 10 μm. SIM series section ( d ) and 3D surface-rendering reconstruction ( e ). Scale bar, 10 μm. Localization of KIFC3 (green) along polyglutamylated sinc-MTs (red) in RCTE cells exposed to IR. f Immunofluorescence images showing KIFC3 and sinc-MTs (labeled with α-tubulin) in control or siTTLL5 RCTE cells after IR exposure. CENTRIN2 labels the ciliary base. Scale bar, 10 μm. Western blot of senescence markers ( g ), quantitation of relative protein levels of senescence markers ( h ), SA-β-gal staining ( i ), relative mRNA level of SASP genes ( j ) in control or shKIFC3 RCTE cells at day 10 after IR exposure. Scale bar, 50 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( d – f ). Source data are provided as a file.

Article Snippet: Sub-cloning templates of human CENEXIN1 and KIFC3 were purchased from Addgene (#73334) and DNASU(#HsCD00442644), and ODF2(iso6) was kindly provided by Dr. Kyung Lee (NIH/NCI).

Techniques: Western Blot, Labeling, Immunofluorescence, Control, Quantitation Assay, Staining

a Immunoprecipitation showing no interaction between V5-tagged KIFC3 and Myc-tagged FBF1 when overexpressed in 293 T cells. b , c Immunoprecipitation of endogenous CENEXIN1 with Myc-tagged FBF1 in IR-treated RCTE cells. d V5-tagged KIFC3 immunoprecipitates with EGFP-tagged CENEXIN1 when overexpressed in 293 T cells. e , f Endogenous CENEXIN1 immunoprecipitates with V5-tagged KIFC3 in control or IR-treated RCTE cells. g Immunofluorescence images showing PML-NBs translocation of CENEXIN1 (green) in IR-treated RCTE cells. PML (red) labels the PML-NBs. Scale bar, 10 μm. h 3D surface-rendering reconstruction of SIM section images showing the spatial relationship among CENEXIN1 (green), KIFC3 (red), and EB1 (cyan) labeled plus-ends of sinc-MTs at ciliary base in IR-treated RCTE cells. Scale bar, 10 μm. Three experiments were repeated independently with similar results ( a – h ). Source data are provided as a file.

Journal: Nature Communications

Article Title: Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner

doi: 10.1038/s41467-024-52363-w

Figure Lengend Snippet: a Immunoprecipitation showing no interaction between V5-tagged KIFC3 and Myc-tagged FBF1 when overexpressed in 293 T cells. b , c Immunoprecipitation of endogenous CENEXIN1 with Myc-tagged FBF1 in IR-treated RCTE cells. d V5-tagged KIFC3 immunoprecipitates with EGFP-tagged CENEXIN1 when overexpressed in 293 T cells. e , f Endogenous CENEXIN1 immunoprecipitates with V5-tagged KIFC3 in control or IR-treated RCTE cells. g Immunofluorescence images showing PML-NBs translocation of CENEXIN1 (green) in IR-treated RCTE cells. PML (red) labels the PML-NBs. Scale bar, 10 μm. h 3D surface-rendering reconstruction of SIM section images showing the spatial relationship among CENEXIN1 (green), KIFC3 (red), and EB1 (cyan) labeled plus-ends of sinc-MTs at ciliary base in IR-treated RCTE cells. Scale bar, 10 μm. Three experiments were repeated independently with similar results ( a – h ). Source data are provided as a file.

Article Snippet: Sub-cloning templates of human CENEXIN1 and KIFC3 were purchased from Addgene (#73334) and DNASU(#HsCD00442644), and ODF2(iso6) was kindly provided by Dr. Kyung Lee (NIH/NCI).

Techniques: Immunoprecipitation, Control, Immunofluorescence, Translocation Assay, Labeling

a Diagram of WT and KIFC3 variants used in experiments. b Endogenous CENEXIN1 immunoprecipitates with V5-tagged WT or KIFC3 DN in RCTE cells, asterisk labels KIFC3 ∆N . c Immunofluorescent images showing localization of NeonGreen(NG)-tagged KIFC3 truncation variants (green) in RCTE cells. γ-tubulin (red) labels the ciliary base. Scale bar, 10 μm. Immunofluorescence images showing the effect of re-expression of KIFC3 or KIFC3 DN on CENEXIN1 and FBF1 translocation. CENEXIN1 (green), FBF1 (red) and PML (cyan) were immunostained by antibodies, respectively ( d ) and quantitation of PML-NBs ( e ) in shKIFC3 RCTE cells with or without IR exposure ( n = 40 cells). Scale bar, 10 μm. Immunofluorescence images showing the changes of CENEXIN1 (red) and PML (cyan) in control or over-expression NG-tagged KIFC3 DN RCTE cells with or without IR treatment ( f ) and quantitation of PML-NBs numbers per cell ( n = 40 cells) ( g ). Localization of KIFC3 DN was shown by NG direct fluorescence (green). Scale bar, 10 μm. h SA-β-gal staining of IR-treated shKIFC3 RCTE cells re-expressing KIFC3 or KIFC3 DN . Scale bar, 100 μm. i Immunofluorescence images showing the impact on the PML-NBs translocation of CENEXIN1 (green) and FBF1 (red) after re-expressing CEP170C-tagged KIFC3 in IR-treated shKIFC3 RCTE cells. γ-tubulin (cyan) labels the ciliary base. YFP direct fluorescence shown CEP170C-tagged KIFC3. Scale bar, 10 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( b , c , h , i ). Source data are provided as a file.

Journal: Nature Communications

Article Title: Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner

doi: 10.1038/s41467-024-52363-w

Figure Lengend Snippet: a Diagram of WT and KIFC3 variants used in experiments. b Endogenous CENEXIN1 immunoprecipitates with V5-tagged WT or KIFC3 DN in RCTE cells, asterisk labels KIFC3 ∆N . c Immunofluorescent images showing localization of NeonGreen(NG)-tagged KIFC3 truncation variants (green) in RCTE cells. γ-tubulin (red) labels the ciliary base. Scale bar, 10 μm. Immunofluorescence images showing the effect of re-expression of KIFC3 or KIFC3 DN on CENEXIN1 and FBF1 translocation. CENEXIN1 (green), FBF1 (red) and PML (cyan) were immunostained by antibodies, respectively ( d ) and quantitation of PML-NBs ( e ) in shKIFC3 RCTE cells with or without IR exposure ( n = 40 cells). Scale bar, 10 μm. Immunofluorescence images showing the changes of CENEXIN1 (red) and PML (cyan) in control or over-expression NG-tagged KIFC3 DN RCTE cells with or without IR treatment ( f ) and quantitation of PML-NBs numbers per cell ( n = 40 cells) ( g ). Localization of KIFC3 DN was shown by NG direct fluorescence (green). Scale bar, 10 μm. h SA-β-gal staining of IR-treated shKIFC3 RCTE cells re-expressing KIFC3 or KIFC3 DN . Scale bar, 100 μm. i Immunofluorescence images showing the impact on the PML-NBs translocation of CENEXIN1 (green) and FBF1 (red) after re-expressing CEP170C-tagged KIFC3 in IR-treated shKIFC3 RCTE cells. γ-tubulin (cyan) labels the ciliary base. YFP direct fluorescence shown CEP170C-tagged KIFC3. Scale bar, 10 μm. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( b , c , h , i ). Source data are provided as a file.

Article Snippet: Sub-cloning templates of human CENEXIN1 and KIFC3 were purchased from Addgene (#73334) and DNASU(#HsCD00442644), and ODF2(iso6) was kindly provided by Dr. Kyung Lee (NIH/NCI).

Techniques: Immunofluorescence, Expressing, Translocation Assay, Quantitation Assay, Control, Over Expression, Fluorescence, Staining

a – d SA-β-gal staining ( a ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200 cells per field) ( b ) in control or siCENEXIN1 RCTE cells with or without IR exposure. Western blot of senescence markers ( c ), and relative mRNA level of SASP genes ( d ) in control or shCENEXIN1 RCTE cells with or without IR exposure. For IR treatment, cells were collected at day 10 after irradiation. Scale bar, 100 μm. SA-β-gal staining ( e ) and quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200–300 cells per field) ( f ), in control or CENEXIN1 -/- RCTE cells re-expressing CENEXIN1 or ODF2 (iso6) at day 10 after IR exposure. Scale bar, 100 μm. SA-β-gal staining ( g ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 3-4fields per experiment, 200–500 cells per field) ( h ), and relative mRNA level of SASP genes ( i ) in IL-1β-treated (3 ng/ml for 5 days) control or shCENEXIN1 RCTE cells. Scale bar, 50 μm. j Proposed working model: Exposure to irreparable stresses triggers the reorganization of microtubules (MTs), leading to the nucleation of sinc-MTs in the proximity of the nuclear envelop towards the ciliary base. Concurrently, the minus-end-directed kinesin KIFC3 is recruited to the ciliary base. It subsequently facilitates the transportation of the CENEXIN1-FBF1 cargo complex along the sinc-MTs, directing it towards the nucleus. This process initiates cellular senescence in stressed human cells. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( c ). Source data are provided as a file.

Journal: Nature Communications

Article Title: Transiently formed nucleus-to-cilium microtubule arrays mediate senescence initiation in a KIFC3-dependent manner

doi: 10.1038/s41467-024-52363-w

Figure Lengend Snippet: a – d SA-β-gal staining ( a ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200 cells per field) ( b ) in control or siCENEXIN1 RCTE cells with or without IR exposure. Western blot of senescence markers ( c ), and relative mRNA level of SASP genes ( d ) in control or shCENEXIN1 RCTE cells with or without IR exposure. For IR treatment, cells were collected at day 10 after irradiation. Scale bar, 100 μm. SA-β-gal staining ( e ) and quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 6-8fields per experiment, 200–300 cells per field) ( f ), in control or CENEXIN1 -/- RCTE cells re-expressing CENEXIN1 or ODF2 (iso6) at day 10 after IR exposure. Scale bar, 100 μm. SA-β-gal staining ( g ), quantitation of SA-β-gal-positive cells ( n = 3 independent experiments, 3-4fields per experiment, 200–500 cells per field) ( h ), and relative mRNA level of SASP genes ( i ) in IL-1β-treated (3 ng/ml for 5 days) control or shCENEXIN1 RCTE cells. Scale bar, 50 μm. j Proposed working model: Exposure to irreparable stresses triggers the reorganization of microtubules (MTs), leading to the nucleation of sinc-MTs in the proximity of the nuclear envelop towards the ciliary base. Concurrently, the minus-end-directed kinesin KIFC3 is recruited to the ciliary base. It subsequently facilitates the transportation of the CENEXIN1-FBF1 cargo complex along the sinc-MTs, directing it towards the nucleus. This process initiates cellular senescence in stressed human cells. All results from n = 3 independent experiments. Data are the mean ± SEM. Statistical significance was determined using one-way ANOVA. Three experiments were repeated independently with similar results ( c ). Source data are provided as a file.

Article Snippet: Sub-cloning templates of human CENEXIN1 and KIFC3 were purchased from Addgene (#73334) and DNASU(#HsCD00442644), and ODF2(iso6) was kindly provided by Dr. Kyung Lee (NIH/NCI).

Techniques: Staining, Quantitation Assay, Control, Western Blot, Irradiation, Expressing